Ethan Smith-Coss
9fb5cefa08
The committed files are a fully functioning implementation of the Karhunen–Loève transform (KLT) as defined on Wikipedia, and verified using multiple languages - Python, R and MATLAB. Note. It may be common for libraries to call this algorithm 'covariance', 'eig' or similar to distiguish from the SVD alogrithm or otherwise. The source code is built entirely on the GNU GSL (2.7) library, to utilise BLAS optimised functionality.
65 lines
1.5 KiB
Makefile
65 lines
1.5 KiB
Makefile
CC = gcc
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INCLUDE_DIR = ./include
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SOURCE_DIR = ./src
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CFLAGS += -I$(INCLUDE_DIR) -ansi -std=c99
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LIBS += -lgsl -lopenblas -lm
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# Debug flags and release flags for GCC
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ifeq ($(BUILD),release)
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CFLAGS += -O2 -s -DNDEBUG
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_BUILD_DIR = ./build/release
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_OBJECT_DIR = ./obj/release
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else
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CFLAGS += -O0 -g
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_BUILD_DIR = ./build/debug
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_OBJECT_DIR = ./obj/debug
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endif
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# Check for required directories for GCC outputs
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ifeq ($(wildcard $(OBJECT_DIR)/.),)
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$(shell mkdir -p $(OBJECT_DIR))
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endif
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# Valgrind specific flags for debugging help
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VALGRIND_ARGS += -s --leak-check=full --track-origins=yes \
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--show-leak-kinds=all
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# Get the system architecture if not specified
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ifeq ($(ARCH),)
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ARCH = $(shell uname -m)
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BUILD_DIR = $(addsuffix $(ARCH), $(_BUILD_DIR)/)
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OBJECT_DIR = $(addsuffix $(ARCH), $(_OBJECT_DIR)/)
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endif
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# Create directories if they don't exist
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ifeq ($(wildcard $(BUILD_DIR)/.),)
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$(shell mkdir -p $(BUILD_DIR))
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endif
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ifeq ($(wildcard $(OBJECT_DIR)/.),)
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$(shell mkdir -p $(OBJECT_DIR))
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endif
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# Binary name for executable to compile
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BINARY_NAME = main
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# Source list files
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SRC = pca matio
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OBJ = $(patsubst %,$(OBJECT_DIR)/%.o,$(SRC) $(BINARY_NAME))
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$(OBJECT_DIR)/%.o: $(SOURCE_DIR)/%.c
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$(CC) -c -o $@ $< $(CFLAGS)
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$(BUILD_DIR)/$(BINARY_NAME).$(ARCH): $(OBJ)
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gcc -std=c99 $(CFLAGS) $(OBJ) $(LIBS) -o $(BUILD_DIR)/$(BINARY_NAME).$(ARCH)
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.PHONY : release
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release:
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$(MAKE) "BUILD=release"
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.PHONY : clean
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clean:
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rm -rf $(OBJECT_DIR)/*.o build
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.PHONY : valgrind
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valgrind:
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valgrind $(VALGRIND_ARGS) $(BUILD_DIR)/$(BINARY_NAME).$(ARCH)
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